PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000361.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 290aa    MW: 33799.4 Da    PI: 8.4293
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000361.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.77.6e-121021663096
                                ..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                         B3  30 keesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                                +++ + lt+e    r+W+v+l +r + g+++lt+GW +F ++n+L  ++ v F++d+ ++++ +v++
  Rmu_sc0000361.1_g000006.1 102 THKRVRLTVEGNPRRRWRVRL-FRDGAGGFWLTEGWVNFYEDNNLGNNELVQFTFDE-ETGNANVTI 166
                                44667899999999*******.8999999*************************987.666667766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MDDRRVAGTC TGFVSLWLRR PSSKRWRLRL VIAEGEVEEG GRGFGRVWPW VCVMADGAVN  60
VLHYTYVGDK TVREFWRRML PGWHTQSLLL HEKYYHLLHY GTHKRVRLTV EGNPRRRWRV  120
RLFRDGAGGF WLTEGWVNFY EDNNLGNNEL VQFTFDEETG NANVTIVVPV DEVVNYDLNT  180
DDEMGCDIYD NQSMQLMRPV GVEFKTHVRR KDLNIPSSIV RRYLKVDYYN VTIIDPELQH  240
WTVGAVPSNT NVKLSSGWPA IVNSKVINEG DHVQLVYVGE KTFKIFKLNY