PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000367.1_g000023.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 168aa    MW: 18493.7 Da    PI: 4.374
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000367.1_g000023.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP61.14.5e-192189472
                        TCP  4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssase 72
                               +k ++++ hTkv+g    + l+ +c ar+ +L+  LG+ ++++t+eWLlqqa+p i+++tg + s+ + 
  Rmu_sc0000367.1_g000023.1 21 GKASTKDGHTKVEGGECCIILPKSCVARIAQLTCDLGHNTNGQTVEWLLQQAEPFIIAATGKNVSPINT 89
                               799***********************************************************6666533 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MGIESNFSTN ASSSRNQVLH GKASTKDGHT KVEGGECCII LPKSCVARIA QLTCDLGHNT  60
NGQTVEWLLQ QAEPFIIAAT GKNVSPINTP STLVDVDLEE NAIRLEDKDL VKKRIIGDQP  120
MLPAYDYYLR LVTQNYEIAD FSANDVAIDV GIQTQEETKN QDGEERLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.13e-21TCP family protein