PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000367.1_g000033.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 114aa MW: 12600.2 Da PI: 4.668

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000367.1_g000033.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	32.9	2.2e-10	8	55	43	83
TCP 43 kdsktieWLlqqakpaikeltgtssssasec.......eaesssssas 83 +d++tieWLl+qa+p+i + tg++ ++++ ++++++s++ Rmu_sc0000367.1_g000033.1 8 TDGQTIEWLLKQAEPSILAVTGNGVTPSNTLstlasvnLQVEKVVSED 55 69*********************9999977742222233333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 114 aa Download sequence
MKNFLSVTDG QTIEWLLKQA EPSILAVTGN GVTPSNTLST LASVNLQVEK VVSEDKNFVR 60 KKCTTGGQPL PPPYDHYLKI ITKNYGIEFS VNDVAIDVGI ETQEEFKEKD GKQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	1e-10	TCP family protein