PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000367.1_g000223.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GATA
Protein Properties Length: 308aa    MW: 34805.9 Da    PI: 8.2076
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000367.1_g000223.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.73.7e-19239272134
                       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                                C++C +tkTp+WR+gp g+ktLCnaCG++yr+ +
  Rmu_sc0000367.1_g000223.1 239 CTHCAVTKTPQWREGPLGPKTLCNACGVRYRSGR 272
                                *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MTAVSADVTK LPKRESTMDA LPLDDNINQL LEHFYDDDTI KALDFPMEDI DATDEDWKTQ  60
LQGLEPYYES NFQYLSTSYE GTSGVTAITS GGRSSLQSND CFDRKHMHLI PIHSPVSVLK  120
SQSESQSSGS AQHLRTLEPN FINIRASEPS FVNPVKKKRT QCRRARPTNF SNRFTFPCAS  180
SNSSVSDNFY RFETFLTEEM MNPDKRKQKK NNPSLQETGE ISETKRSMEP GESRETKRCT  240
HCAVTKTPQW REGPLGPKTL CNACGVRYRS GRLYPEYRPA ASPTFVPAVH SNSHKKVIEL  300
RNKGCQGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.21e-44GATA family protein