PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000368.1_g000013.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 170aa    MW: 19037.5 Da    PI: 10.0831
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000368.1_g000013.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox52.77.1e-17767256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                                +R+ +t++q+++L+e++     + p+ e+ ++++ +l    +++ ++V++WFqN+Ra+ek
  Rmu_sc0000368.1_g000013.1  7 NTRWLPTTDQIRILKEVYDDkgVKSPTIEQVQRITLQLkwygQIENKNVFYWFQNQRAQEK 67
                               58*****************6579************************************98 PP
2Wus_type_Homeobox92.53.8e-30670265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRW Pt++Qi+iL+e+y+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWFQN++a e+ k+
  Rmu_sc0000368.1_g000013.1  6 SNTRWLPTTDQIRILKEVYDdKGVKSPTIEQVQRITLQLKWYGQIENKNVFYWFQNQRAQEKLKK 70
                               789****************999***************************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MHCKQSNTRW LPTTDQIRIL KEVYDDKGVK SPTIEQVQRI TLQLKWYGQI ENKNVFYWFQ  60
NQRAQEKLKK KKLTSDVQVP KQRSGLVGGS NNLNFGSTSS AGVGGSIMEQ RGEDHQEIKT  120
LPLFPMHGED IFGNMKTTSD GGGGHGGGSY ISLELSLSYE GKAGKIFRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.17e-27WOX family protein