PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000382.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 131aa    MW: 14993.1 Da    PI: 9.2931
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000382.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR140.87.5e-1356116159
                       FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetr 59 
                                +fYn+YAk +GF+vr ++++ s + +g +t+ ++vCs +gkr+ee  + +++ +++++etr
  Rmu_sc0000382.1_g000008.1  56 SFYNAYAKAMGFDVRSDYKRLSiRITGIVTSLRLVCSAQGKRREEYMSnKKRVHKPKKETR 116
                                5******************999999*******************99982233334555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MDGSYEPSIS DIGLVSQSSI NGSDCNEMQY KGVRYDKLST EDLKGQEFKT VEEAESFYNA  60
YAKAMGFDVR SDYKRLSIRI TGIVTSLRLV CSAQGKRREE YMSNKKRVHK PKKETRFNYL  120
PTVMVNLILL V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.16e-09FAR1 family protein