PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000388.1_g000020.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TALE

Protein Properties

Length: 775aa MW: 83866.7 Da PI: 7.0704

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000388.1_g000020.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.7e-09	528	565	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + Rmu_sc0000388.1_g000020.1 528 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 565 664459******************************88 PP
2	BELL	120.3	8.2e-39	388	459	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+l+eVd+rY++y+eq+q+v+++F+ v+g g+a pYt+lA+ka+SrhFrcLkda++ q+ Rmu_sc0000388.1_g000020.1 388 DRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNAFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAVTAQL 459 589******************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 775 aa Download sequence
MSQDYHQSIY SFPNGFERSA MTTHQEQQQQ QQQQHHLAQQ IRREKLRVQG FEPPPPPLVG 60 LDEEESNPVY ETAGMLSEMF NYPAGVAPPA ELLEHPMAAG YRMARPQQHQ SAAAEWYGSR 120 QNMVGGLGPL GDSNKNQSGR DNLAVHQHQI STINADSAAA MQLFLMNPQP RSPSPPAHST 180 SSTLHMLLPN PSSTTFPGAG GGGGGAFGQF SWVSPDTHGH EGGSTTGPAH QLNTSNINPS 240 DHHQQGLSLS LSTSLQHLEA AKAEELRMGD GSGLLYYNNP EGSSSTAHYS QYKNLVGHQS 300 QQVHVGFGSS SFGVVNVLRN SKYVKAAQEL LEEFCSVGRG QLKKNKLGRQ NSSLNPSSNP 360 AGTSGGGAGG GASSSSSKDA PPTLSAADRI EHQRRKVKLL SMLDEVDRRY NHYCEQMQMV 420 VNAFDLVMGF GAAVPYTALA QKAMSRHFRC LKDAVTAQLK HSCELLGEKD GAGNSGITKG 480 ETPRLKMLEQ SLRQQRAFHQ MGMMEQEAWR PQRGLPERSV NILRAWLFEH FLHPYPSDAD 540 KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQEAN EEGGGAAAAA AVSVDQDQRS 600 EQRNNQNNNI SDHHAQTPTP PTTTTTTTAM SATTTTTVAT RSDINASESD PSLLAFNRQR 660 SFSENQSTTP TYPINMSTST TATPLVAPPV PYPTTADDTC RRGSMDYGTT SGNASSSAVA 720 GDHQSLHHHA GSTLITFGTT TAGDVSLTLG LRHAGGANIP EKNTSSFSIR DFGGC

Sequence ? help Back to Top

Protein Sequence Length: 775 aa Download sequence

MSQDYHQSIY SFPNGFERSA MTTHQEQQQQ QQQQHHLAQQ IRREKLRVQG FEPPPPPLVG  60
LDEEESNPVY ETAGMLSEMF NYPAGVAPPA ELLEHPMAAG YRMARPQQHQ SAAAEWYGSR  120
QNMVGGLGPL GDSNKNQSGR DNLAVHQHQI STINADSAAA MQLFLMNPQP RSPSPPAHST  180
SSTLHMLLPN PSSTTFPGAG GGGGGAFGQF SWVSPDTHGH EGGSTTGPAH QLNTSNINPS  240
DHHQQGLSLS LSTSLQHLEA AKAEELRMGD GSGLLYYNNP EGSSSTAHYS QYKNLVGHQS  300
QQVHVGFGSS SFGVVNVLRN SKYVKAAQEL LEEFCSVGRG QLKKNKLGRQ NSSLNPSSNP  360
AGTSGGGAGG GASSSSSKDA PPTLSAADRI EHQRRKVKLL SMLDEVDRRY NHYCEQMQMV  420
VNAFDLVMGF GAAVPYTALA QKAMSRHFRC LKDAVTAQLK HSCELLGEKD GAGNSGITKG  480
ETPRLKMLEQ SLRQQRAFHQ MGMMEQEAWR PQRGLPERSV NILRAWLFEH FLHPYPSDAD  540
KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQEAN EEGGGAAAAA AVSVDQDQRS  600
EQRNNQNNNI SDHHAQTPTP PTTTTTTTAM SATTTTTVAT RSDINASESD PSLLAFNRQR  660
SFSENQSTTP TYPINMSTST TATPLVAPPV PYPTTADDTC RRGSMDYGTT SGNASSSAVA  720
GDHQSLHHHA GSTLITFGTT TAGDVSLTLG LRHAGGANIP EKNTSSFSIR DFGGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-146	TALE family protein