PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000467.1_g000012.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB

Protein Properties

Length: 185aa MW: 20993.5 Da PI: 6.6772

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000467.1_g000012.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44	5.3e-14	2	43	7	48
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 eEd++l+++++ +G g W++ a+ g++Rt+k+c++rw++yl Rmu_sc0000467.1_g000012.1 2 EEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYL 43 9***************************************97 PP
2	Myb_DNA-binding	55.9	9.7e-18	49	92	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+ ++++++G++ W++Ia++++ gRt++++k++w++ Rmu_sc0000467.1_g000012.1 49 RGNITPEEQLLIMELHAKWGNR-WSKIAKHLP-GRTDNEIKNYWRT 92 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MEEDLILINY IANHGEGVWN SLAKSAGLKR TGKSCRLRWL NYLRPDVRRG NITPEEQLLI 60 MELHAKWGNR WSKIAKHLPG RTDNEIKNYW RTRIQKHIKQ GDQSNSQGQS SEGTADQAST 120 SQMGSSSTTG LDPMETTYPL CPTTASYPVT LVQPPDHPNV VPPPDSNQES YWSMEDLWSM 180 QLLNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	1e-72	MYB family protein