PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000477.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 194aa MW: 21843.7 Da PI: 8.6747

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000477.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	42.2	2.5e-13	73	177	6	99
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikev.diy.....kvePwdLpk...kvka.eekewyfFskrdkkyatgkrknratk 79 FhPt+ elv ++L +k++ +++ ++i+++ +i+ + Pw++ + ++k +++ +yf+s ++k +++++r++r++ Rmu_sc0000477.1_g000006.1 73 TFHPTEAELVGFFLYNKISMASNPG-NHIQTFpEICiygetGLPPWEIWRvyqQFKFpHQDFLYFYSWAKKVSPNKSRNSRTVG 155 5***************9999666.3344444444112224589999632333333344456**************755 PP NAM 80 ..sgyWkatgkdkevlskkgel 99 g+W++t ++v+ +++e+ Rmu_sc0000477.1_g000006.1 156 sdGGTWSETEAGRPVYISGSEE 177 4589*********9975544 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MDWELVLARF VEICNGELTF QRGGGRRRSL ADEGGVLVAA TAGTRFSSAR PGLLARPDQF 60 MTLDQLDVGV VKTFHPTEAE LVGFFLYNKI SMASNPGNHI QTFPEICIYG ETGLPPWEIW 120 RVYQQFKFPH QDFLYFYSWA KKVSPNKSRN SRTVGSDGGT WSETEAGRPV YISGSEEAFG 180 KVRKFRSPMF EGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61910.1	1e-08	NAC family protein