PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000507.1_g000009.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 224aa    MW: 24511.8 Da    PI: 7.8726
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000507.1_g000009.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP66.97.1e-211661247
                        TCP  2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdskt 47
                               +g kd+hsk++T +g+RdR++Rl+a++a++f+d+qd+LG+d++sk 
  Rmu_sc0000507.1_g000009.1 16 TGPKDSHSKVCTTKGPRDRSIRLVAHTAIQFYDMQDRLGYDQPSKG 61
                               788*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
LLLPPPLEKS WRLKATGPKD SHSKVCTTKG PRDRSIRLVA HTAIQFYDMQ DRLGYDQPSK  60
GVGGENESGG GQAIGGGGRD ELGVNGSTTR ERSFITCSGA LATLSGAKIG QCPRDKRVVK  120
DESTEQKLWC IRLTPEELEN FGTPDFTIYN AVVENVTFDE HTREVDYSDK SITENSRAAY  180
PIEYIPNAKI PFVGPHPKNV ILLACDAFVV LPPVSKLNLA LKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.13e-20TCP family protein