PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000507.1_g000017.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 254aa    MW: 27678.8 Da    PI: 5.945
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000507.1_g000017.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox44.62.5e-1443102457
                                -SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   4 RttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                R+t+t+ ql++L+ l++    + p+ e+++e+  +l    ++++++V++WFqN +a++++
  Rmu_sc0000507.1_g000017.1  43 RWTPTPAQLRILQGLYYDkgYKCPTPEHIQEICLHLkpygQIEDKNVFFWFQNLKARDRQ 102
                                9***************9645888**********************************996 PP
2Wus_type_Homeobox91.67.2e-3041103364
          Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                + RWtPtp Q++iL+ ly+ +G + P+ e+iq+i  +L+ yG+iedkNVf+WFQN kaR+rqk
  Rmu_sc0000507.1_g000017.1  41 TIRWTPTPAQLRILQGLYYdKGYKCPTPEHIQEICLHLKPYGQIEDKNVFFWFQNLKARDRQK 103
                                67***************9889*****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDLEGFSSFE VHLVRRPLLL LCLACTQAAR SSANTPIRST TIRWTPTPAQ LRILQGLYYD  60
KGYKCPTPEH IQEICLHLKP YGQIEDKNVF FWFQNLKARD RQKLKEFRKV RVGGSLDLNF  120
GSTSSTDDGR SIDLHFGSTG STGDDGSIDL TLGSRVGYGV DPNSFSPFNA NTSTISFGTT  180
GGQYFMERRG GDHQEVETLP LFPVHGEDVL GNPKTTSEEG SAYGYYSGGS GGYNSGSPVS  240
LELSLNPSGA TDLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.17e-21WOX family protein