PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000516.1_g000051.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 73aa MW: 7857.88 Da PI: 11.0154

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000516.1_g000051.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	36.1	2.2e-11	44	73	1	30
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaa 30 a+g+kd+hsk++T +g+RdR++Rl+a++a+ Rmu_sc0000516.1_g000051.1 44 ATGRKDSHSKVCTTKGPRDRSIRLVAHTAI 73 589*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 73 aa Download sequence
MFTCLYHRTT TSSSAASRLG LGIRTDSSST ASEIVEAQGH ILRATGRKDS HSKVCTTKGP 60 RDRSIRLVAH TAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-16	TCP family protein