PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000524.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Trihelix
Protein Properties Length: 170aa    MW: 19488 Da    PI: 7.4993
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000524.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.32.2e-097663186
                   trihelix 31 Weevskkm...rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86
                               W++v++           ++  qC++k+e+l+kry+++k+++++     sss +++f+ ++
  Rmu_sc0000524.1_g000010.1  7 WDHVAASTasaTPSSQPKTTLQCRHKMEKLRKRYRAEKQRASRYpGRSSSSLWALFHLMD 66
                               666666664333334467788*********************9855778889*****998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MLSFIFWDHV AASTASATPS SQPKTTLQCR HKMEKLRKRY RAEKQRASRY PGRSSSSLWA  60
LFHLMDEMES DPDRGLDNGG EFSLKALNLM KFDGNGGWNG PIGGETTREA QRYAYNCMLF  120
LSKPLVLKPS STSATSLILY KLTKMEKTFE AFECHDEEEE NVVEETYYKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.17e-10Trihelix family protein