PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000524.1_g000034.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 156aa    MW: 17364.6 Da    PI: 9.1488
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000524.1_g000034.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP76.57.8e-2455113260
                        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaik 60 
                                + +kdrhsk++T++g+Rd  v + a++a++f+d+qd+ G+d++sk+++W +++ak+ai 
  Rmu_sc0000524.1_g000034.1  55 TDRKDRHSKVYTAKGPRDHLVQITAHTAIQFYDVQDRVGYDRPSKAVDWIIKKAKAAIN 113
                                679******************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEYAGRKIGE SHNNLHHRAM TSSSAASRLG LGIRTASSSI ASEIVEARGH ILRATDRKDR  60
HSKVYTAKGP RDHLVQITAH TAIQFYDVQD RVGYDRPSKA VDWIIKKAKA AINFMELELN  120
FCSDNFFFDG ADIRLAGHAE REPPFLDGGG SKFFVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.11e-34TCP family protein