PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000530.1_g000034.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 104aa    MW: 12177.1 Da    PI: 10.3197
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000530.1_g000034.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP84.13.4e-262385264
                        TCP  2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltg 64
                               + +kdrhsk++T++g++d Rv l +++a++f+d+qd+LG+d++sk+++W +++ak+ i+el+ 
  Rmu_sc0000530.1_g000034.1 23 TDRKDRHSKVYTAKGPKDHRVWLASHTAIQFYDMQDRLGYDRPSKAVDWVIKKAKAIIDELPP 85
                               679*********************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MEYAGRKMGE SHNNLHHRTM TATDRKDRHS KVYTAKGPKD HRVWLASHTA IQFYDMQDRL  60
GYDRPSKAVD WVIKKAKAII DELPPWNPNC LLAFMKIMQL ALNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.21e-32TCP family protein