PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000545.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family M-type_MADS
Protein Properties Length: 220aa    MW: 24601.4 Da    PI: 9.864
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000545.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF663.9e-211760245
                               ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
                     SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                               +i n sn qvtfskR +g++KKA+EL++LC++e+a+++fs+++k
  Rmu_sc0000545.1_g000001.1 17 KIPNRSNLQVTFSKRCAGLFKKASELCTLCGVEIAIVVFSPSNK 60
                               588**************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MQIKKPSQGR QKIAITKIPN RSNLQVTFSK RCAGLFKKAS ELCTLCGVEI AIVVFSPSNK  60
PFSFGHPSIK TLIGRFLSPS PSSFPSSTQQ ALYPRKASVE HELNMQLTGT QGRLEAEKKR  120
GEELDKMSKD SQRSSHCWWE KPIEELGLDG LQMLKATMEE LKKNVMEQIH KINGPAKFSV  180
PFSVMNLDHH LSERKFAEIN GCHGSMIPSC AYGYGHGSFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.16e-50M-type_MADS family protein