PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000550.1_g000022.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 119aa    MW: 12958.7 Da    PI: 11.1383
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000550.1_g000022.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP93.15.8e-293599165
                        TCP  1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65
                               a+g+kdrhsk++T++g+Rd RvRl a++ ++f+d qd+LG+ ++sk+++WL+++ak+ i el   
  Rmu_sc0000550.1_g000022.1 35 ATGRKDRHSKVCTAKGPRDHRVRLAAHTTIQFYDAQDRLGYYRPSKAVDWLIKKAKAVINELQPW 99
                               589**********************************************************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MTSSSAASRL GLGIRTSSSS TASEIVEARG HILRATGRKD RHSKVCTAKG PRDHRVRLAA  60
HTTIQFYDAQ DRLGYYRPSK AVDWLIKKAK AVINELQPWN PNSISVQTTS SPTVPISAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.22e-40TCP family protein