PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000565.1_g000023.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 166aa    MW: 19025 Da    PI: 10.2966
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000565.1_g000023.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.000887793218
                               EETTTTEEESSHHHHHH CS
                    zf-C2H2  2 kCpdCgksFsrksnLkr 18
                               +C+ Cg sF+ + +Lk+
  Rmu_sc0000565.1_g000023.1 77 TCEECGASFKKPAYLKK 93
                               6*************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MLANSYVDIE SGEVLYPGLS SKNQLRWGFI RKVYGILSAQ LLLTTDISFS TVLYTPVKDE  60
MEMAKAGGEV VVEKSNTCEE CGASFKKPAY LKKRMQSHSP EKAVWKDANR VGKVFLFWRP  120
VQYFSGRFRL GATRCRQRFW IPRIRGYKVC GGGYSNLRTT NLRFQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.22e-08C2H2 family protein