PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000574.1_g000049.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 349aa MW: 38950.7 Da PI: 4.1111

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000574.1_g000049.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	35.5	2.9e-11	1	27	102	128
NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +kktLvf++grapkg +t+Wvmheyrl Rmu_sc0000574.1_g000049.1 1 MKKTLVFHSGRAPKGARTNWVMHEYRL 27 8************************98 PP
2	NAM	42.1	2.6e-13	202	232	98	128
NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 e+vg+kktLvf++grapkg +t+Wvmheyrl Rmu_sc0000574.1_g000049.1 202 EAVGMKKTLVFHSGRAPKGARTNWVMHEYRL 232 579**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MKKTLVFHSG RAPKGARTNW VMHEYRLDNQ ELEKAGIIEK DAYVLCRIFQ KSGTGPKNGE 60 QYGAPFIEEE WDEEDEVYGP GEEAIANEVA VSGGPYTEAN ELSDEGYVEA IDLDQIDTGV 120 PESGPRPLNF YHGETSNYIE QSGDLVEDAA KTAVGAGETL EYCEEQKYFD LPEQYEMEAK 180 PVKVEYLTSD YHDNQNFFNL PEAVGMKKTL VFHSGRAPKG ARTNWVMHEY RLDNQELEKA 240 GIIEKDAYVL CRIFQKSGTG PKNGEQYGAP FIEEEWDEED EVYGPGEEAI ANEVAVSGGP 300 YTEANELSDG GYVEAIDLDQ SMPHNNTKCP LYAASHCFHF SEVSSVSLV

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MKKTLVFHSG RAPKGARTNW VMHEYRLDNQ ELEKAGIIEK DAYVLCRIFQ KSGTGPKNGE  60
QYGAPFIEEE WDEEDEVYGP GEEAIANEVA VSGGPYTEAN ELSDEGYVEA IDLDQIDTGV  120
PESGPRPLNF YHGETSNYIE QSGDLVEDAA KTAVGAGETL EYCEEQKYFD LPEQYEMEAK  180
PVKVEYLTSD YHDNQNFFNL PEAVGMKKTL VFHSGRAPKG ARTNWVMHEY RLDNQELEKA  240
GIIEKDAYVL CRIFQKSGTG PKNGEQYGAP FIEEEWDEED EVYGPGEEAI ANEVAVSGGP  300
YTEANELSDG GYVEAIDLDQ SMPHNNTKCP LYAASHCFHF SEVSSVSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	6e-39	NAC family protein