PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000588.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 84aa    MW: 9743.91 Da    PI: 4.7403
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000588.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.11.1e-12483171
                        NAM  1 lppGfrFhPtdeelvveyLkkk..vegkk...leleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatg 71
                               +p+Gf FhPt++el+ +yL  k  v++++     +++v++e+d+y +++Pw++      ++ ++++++fF k +k +++g
  Rmu_sc0000588.1_g000007.1  4 VPVGFWFHPTEDELIRFYLYMKnkVSAREddsEAATTVVPEFDLYgETQPWNIWVahgGADLHDQDLFFFKKLNKVNPHG 83
                               599**************997661155555553333357*****99568*****73233444478899***9999988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MANVPVGFWF HPTEDELIRF YLYMKNKVSA REDDSEAATT VVPEFDLYGE TQPWNIWVAH  60
GGADLHDQDL FFFKKLNKVN PHGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.19e-11NAC family protein