PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000595.1_g000061.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 303aa    MW: 32948.8 Da    PI: 4.3171
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000595.1_g000061.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.64.2e-081491981356
                                HHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  13 eeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 
                                ++Leel+     + p+ e+ ++++ +l    +++ ++ ++WFqN+ a ek
  Rmu_sc0000595.1_g000061.1 149 RVLEELYDDkgVKSPTVEQVQRITLQLkwygQIENKNAFYWFQNQSALEK 198
                                79*****96569********************************877665 PP
2Wus_type_Homeobox64.32.4e-211482001364
          Wus_type_Homeobox  13 ikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++Leely+ +G+++P+ e++qrit +L+ yG+ie+kN fyWFQN+ a e+ k
  Rmu_sc0000595.1_g000061.1 148 MRVLEELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNAFYWFQNQSALEKLK 200
                                68******999************************************999877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MTTEILAALK VQEVNEAGPL PLGDHVPDID PTAREDSVCT EEAATNNEGP IGGTVAPEME  60
NDTDGGGSLQ VSQINEKTVE AEGPVLKSAL LAHGEPRVEF PDSPAAEGID QPIEDEETEE  120
AIHPFALVVR DPVAPLPPPP PTRFERLMRV LEELYDDKGV KSPTVEQVQR ITLQLKWYGQ  180
IENKNAFYWF QNQSALEKLK NNKLTSDVQV PKQRSGLVGG SINLNFGSTS SAGVGGSIME  240
QRGEDHQEVK TLPLFPMHSE DIFGNMKTTS NEGGGHGGDS YISLELSLSC EGKAKIRACW  300
WIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11260.11e-14WOX family protein