PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000607.1_g000039.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 198aa MW: 21759 Da PI: 4.1167

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000607.1_g000039.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.8	1.5e-07	39	87	3	45
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHH CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVk 45 +R+t+ ++ql++L+el++ + p+ e+++e+ +l ++++++V+ Rmu_sc0000607.1_g000039.1 39 NRWTPAPDQLRILQELYYDkvLKCPTPEQIQEICLNLqqygQIEDKNVF 87 7**************96679*************999999999997 PP
2	Wus_type_Homeobox	62.2	1.1e-20	37	88	2	52
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfy 52 +++RWtP p+Q++iL+ely+ + l+ P+ e+iq+i +L++yG+iedkNVf+ Rmu_sc0000607.1_g000039.1 37 TNNRWTPAPDQLRILQELYYdKVLKCPTPEQIQEICLNLQQYGQIEDKNVFF 88 679*************9868899************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MEPRTLLLME LQAQQPTEEG GSIQAAGSSA NTPIRPTNNR WTPAPDQLRI LQELYYDKVL 60 KCPTPEQIQE ICLNLQQYGQ IEDKNVFFCS TDDGRSIDLN FGSTGSTSTD RSIDLNFGSR 120 VGYGVDGSIM EQRGEYHQEI ETLPLFPMHG ENVFGNMKTT SEGGSGYGYY SDGWDDNNGG 180 SCISLKLSLY SSGAADMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	1e-15	WOX family protein