PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000627.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 200aa    MW: 22099.3 Da    PI: 6.783
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000627.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.53e-1758109156
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                                + ykGVr+++  g+Wv+e r+p   g k+ r++lg+f  +e+Aa+a++ a+++l+ge
  Rmu_sc0000627.1_g000006.1  58 PVYKGVRQRS--GKWVCEMRHP---GlKKSRVWLGTFTCPEMAARAYDVAALALKGE 109
                                68****9865..*********9...9999*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MLCDASASSL MAYREEPAAP SSPASLLMNL GQTLTHIQSG VTKKRKAGRK KFKETRHPVY  60
KGVRQRSGKW VCEMRHPGLK KSRVWLGTFT CPEMAARAYD VAALALKGES ALLNFPDEAK  120
ASPSSTSSMS FPELTSMVNL EKVEVGSSKG YVDEEELFNM PEILDSMAEG LILTPPALKK  180
GFNWDDYDLE NAVEFSLWSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.15e-28ERF family protein