PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000631.1_g000026.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 252aa MW: 27496.3 Da PI: 9.2143

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000631.1_g000026.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	94.4	2.3e-29	91	182	1	83
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec... 73 a+g+kdrhsk++T +g+Rd RvRl ++a++f+dLqd+L +d++s +++WL+++ak+ i+el++ ++ss+ + Rmu_sc0000631.1_g000026.1 91 ATGRKDRHSKVCTTKGPRDHRVRLATHTAIQFYDLQDRLRYDQPSMAVDWLIKKAKAVIDELPSWnpnsisvqTTSSP--Tili 172 589************************************************************996555544311111..1123 PP TCP 74 eaesssssas 83 +a++++++a+ Rmu_sc0000631.1_g000026.1 173 SAAQDKQNAN 182 2222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
LWINHHLPSL SLSDHSSTSR SASRSLPCST ATLSRYLPAE RLLSLNNSAA LIYADGSLII 60 STLAGSSTGI GTASSSTASE IVEARGHILK ATGRKDRHSK VCTTKGPRDH RVRLATHTAI 120 QFYDLQDRLR YDQPSMAVDW LIKKAKAVID ELPSWNPNSI SVQTTSSPTI LISAAQDKQN 180 ANLHFSMVEA SSSLFANRRG AMVGSSEVAE LVNQNSSNFL QVRMVWRPKL MLIFVCLQLP 240 LIEVGLEAEV VD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	5e-37	TCP family protein