PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000665.1_g000025.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 203aa    MW: 23374.7 Da    PI: 9.6541
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000665.1_g000025.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.74.1e-13111195291
                                EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                         B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                                  ++ + +v+k   l  p++f+++   k +++++l++ d    +Wev+ i+  +ks+   +++GW +Fv+ ngL+egD + F+l
  Rmu_sc0000665.1_g000025.1 111 SVQMCQTHVTKGP-LLTPRSFMRNTH-K-PKKVELQVGD---MVWEVNWIHpYQKSS--RFSGGWLRFVSHNGLQEGDLCDFEL 186
                                5677777888877.555*****5554.3.2445555554...99****977544444..489*********************9 PP

                                -SS..SEE. CS
                         B3  85 dgr..sefe 91 
                                +++  + + 
  Rmu_sc0000665.1_g000025.1 187 ISKtnEVAV 195
                                964233333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MGSCSRRRED EGSENPGFYK CVDYSVLSTG KLYIGHAKFN VEIYGLNRCN KMSKARKSDR  60
LLDDFDVIIV YSDSDSEIEF PREPVCRRKL SRRGRPRNLA TVNRSGNPCF SVQMCQTHVT  120
KGPLLTPRSF MRNTHKPKKV ELQVGDMVWE VNWIHPYQKS SRFSGGWLRF VSHNGLQEGD  180
LCDFELISKT NEVAVMNVSI RKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.15e-08B3 family protein