PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000674.1_g000028.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 255aa    MW: 27983.1 Da    PI: 9.0485
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000674.1_g000028.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.38.9e-19126176155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                + y+GVr++  +g+WvAeIr p   + r  r +lg+f ta eAa a+++a+++++g
  Rmu_sc0000674.1_g000028.1 126 CNYRGVRQRT-WGKWVAEIRSP---N-RgSRLWLGTFPTAIEAALAYDEAARAMYG 176
                                56*****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MKKNGSFSPK AYWVHGLSCI RDKISNDCAN FRPQLRDSRL GSHGAEQGIS LYSLFSTNLD  60
CMTKLNKFHS KQDGSNPVAE TLAKWKELND NLESSNDGSK PTRKVPAKGS KKGCMKGKGG  120
PENSRCNYRG VRQRTWGKWV AEIRSPNRGS RLWLGTFPTA IEAALAYDEA ARAMYGSSAR  180
LNFPKVTISS YSTNSSCRAT LSAPSCVVTS AGSESSGHSE DFSPQDKVNS HSPHVVNTDV  240
IDLNQMDLNH TEEDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.22e-37ERF family protein