PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000690.1_g000051.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family CAMTA
Protein Properties Length: 173aa    MW: 19654.8 Da    PI: 5.0643
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000690.1_g000051.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-162.48e-201881366
                       CG-1  3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktv 66
                               ++k  wl+++ei++++++++++  t++++ +p+sgs+iLynr +v+ fr+D ++w kkk+ +++
  Rmu_sc0000690.1_g000051.1 18 QKKPGWLHQNEICQYIQDHNSYVTTKQPPFKPPSGSIILYNRNVVKGFRNDAHEWEKKKESHAT 81
                               44778*****************************************************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MVESSGGGTA GIPQIIKQKK PGWLHQNEIC QYIQDHNSYV TTKQPPFKPP SGSIILYNRN  60
VVKGFRNDAH EWEKKKESHA TLKVTLYMLR NATNERPNKR PGLEVLQFAN CGCNGFTMCD  120
RNGDDETQSI QTDESYQDFL SLLEINDENM TYAPQNGRLE TNDVEIKDEN AES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-16CAMTA family protein