PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000696.1_g000016.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

C2H2

Protein Properties

Length: 174aa MW: 19286.2 Da PI: 10.5296

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000696.1_g000016.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00021	106	128	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg+ F+ L H+r+H Rmu_sc0000696.1_g000016.1 106 HECPICGMEFPIGQALGGHMRRH 128 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MQLSNNVRSQ FHTHKMKRAR EDEQQTQDLV NCLMLLSKVD RNHSSTIREQ NSSGRVFACK 60 TCNREFSSFQ ALGGHRASHK KPKLDGGAAD LLHLAQPSLP VKPKAHECPI CGMEFPIGQA 120 LGGHMRRHRD VMSSAAERIR AAAVPVLKKS NSSKRVSCLN LDLNLAPPGY HLIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59820.1	1e-38	C2H2 family protein