PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000741.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 115aa    MW: 13821.1 Da    PI: 11.0233
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000741.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP54.45.1e-179581564
                        TCP 15 vggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltg 64
                               +g+Rd  v l a++a++++d+qd L +d++s +++WL+++ak+ i+el+ 
  Rmu_sc0000741.1_g000001.1  9 QGPRDQHVQLAAHTAIQLYDVQDHLRYDRPSMAVDWLIKKAKATIDELPP 58
                               8**********************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
PPQQGLHRQG PRDQHVQLAA HTAIQLYDVQ DHLRYDRPSM AVDWLIKKAK ATIDELPPWN  60
PNLILFRQHL LRLCRYPLRR TRITRASISR WWRLRVLCLL IGEAQLWAAV EWWSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.23e-23TCP family protein