PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000744.1_g000127.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 284aa    MW: 31686.1 Da    PI: 7.3084
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000744.1_g000127.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox49.57.1e-163999357
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               +R+t+t++ql++L+el++    + p+ e+++e+  +l    ++++++V++WFqN +a+e++
  Rmu_sc0000744.1_g000127.1 39 NRWTPTPDQLRILQELYYDkvLKCPTPEQIQEICLNLqqygQIEDKNVFFWFQNLKARERQ 99
                               7****************96679*************************************97 PP
2Wus_type_Homeobox95.44.8e-3137100264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp+Q++iL+ely+ + l+ P+ e+iq+i  +L++yG+iedkNVf+WFQN kaRerqk
  Rmu_sc0000744.1_g000127.1  37 TNNRWTPTPDQLRILQELYYdKVLKCPTPEQIQEICLNLQQYGQIEDKNVFFWFQNLKARERQK 100
                                579***************9868899**************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MEPRTLQLME LQAQQPTEEG GSIQAAGSSA NTPIRPTNNR WTPTPDQLRI LQELYYDKVL  60
KCPTPEQIQE ICLNLQQYGQ IEDKNVFFWF QNLKARERQK LREFRNVRVG GSLDLNFGST  120
SSTDDGRSID LNFGSTGSTS TDRSIDLNLG HVSALVLMDR SWNNEENITR RLKPFHCSPC  180
TVRTSLATRR LLPRKVAHMV GTPVAGTTTM VVLAFLLSLV STPPELLTWL NRAEREPLGS  240
EENLLKCDFS LAGLLGRYPC LAGSVTVVVA ALPSAPEETR TEVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-24WOX family protein