PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000755.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 261aa    MW: 30428.2 Da    PI: 5.3009
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000755.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM54.83.2e-17161302128
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                                 pG rF P ++elv +yLk+   g+   l    +  +   + P+dL+      +k++yfF+++++ ++t++r +r++ +g+Wk 
  Rmu_sc0000755.1_g000007.1  16 LPGERFCPMEDELVLFYLKPMFCGSCRWL----D--RGRACRPNDLR-----LNKDIYFFTQHKTMSSTDTRIRRTVGNGTWKG 88 
                                589******************99987444....2..456789****7.....3579***************************9 PP

                        NAM  86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                  + k+v+s  +g++vglkk L++ + +a++ ++  W++ e+ l
  Rmu_sc0000755.1_g000007.1  89 DDSGKPVKSLeTGRVVGLKKRLTYKN-QASE-HNGCWILYEFYL 130
                                999999988668999********984.3333.6999*****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MQQQFAVEES RGNDQLPGER FCPMEDELVL FYLKPMFCGS CRWLDRGRAC RPNDLRLNKD  60
IYFFTQHKTM SSTDTRIRRT VGNGTWKGDD SGKPVKSLET GRVVGLKKRL TYKNQASEHN  120
GCWILYEFYL DPSLRDKKQK VEDYVLCLLR KNGEPKAKIK KRRKQREEED VLENNYACDD  180
GENTNKEQPQ AKRQRMGEQN GGLQHFVSEV QSGDDHGMLI PLPEEDFLWE EMLQQMGIGD  240
DHGIPEEDFL WEDILQQIGS N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160164KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.17e-13NAC family protein