PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000770.1_g000052.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 148aa    MW: 16609.4 Da    PI: 9.0704
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000770.1_g000052.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox41.22.8e-133389555
                               SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHH CS
                   Homeobox  5 ttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRake 55
                               + +t + +++L+el+     + p+ e+ ++++ +l    +++ ++V++WFqN+Ra+e
  Rmu_sc0000770.1_g000052.1 33 WLPTIDHIRILKELYDDkgVKSPTVEQVQRITLQLkwygQIENKNVFYWFQNQRAQE 89
                               7789999********96579***********************************87 PP
2Wus_type_Homeobox85.17.7e-282993265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++t W Pt + i+iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWFQN++a e qk+
  Rmu_sc0000770.1_g000052.1 29 SNTGWLPTIDHIRILKELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWFQNQRAQENQKK 93
                               5788***************999****************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MEPKNRHPTE DGGSNKAAES SPNMHCEQSN TGWLPTIDHI RILKELYDDK GVKSPTVEQV  60
QRITLQLKWY GQIENKNVFY WFQNQRAQEN QKKKKLTSDA QVPKQRSGLV GGSINLNFGS  120
TSSAGVGGSI MEQRGEDHQE TSTVSHAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-25WOX family protein