PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000837.1_g000065.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 244aa    MW: 28599.9 Da    PI: 10.0381
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000837.1_g000065.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.25.3e-08471054790
                       FAR1  47 k..............tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                                               +++  r +  +rt+C a+++v  ++ ++ ++v+k++++HnH+la
  Rmu_sc0000837.1_g000065.1  47 CgmkeapngdknkvcRKRLLRGKRISRTDCPAQFMVMWSNhQDLFYVSKFVTQHNHDLA 105
                                0333333333333455555678999********999988879**************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MWLALAQGKL KKTYTKPRKQ YIEGSGRVCS KVDRHVSVQK TKEVGGCGMK EAPNGDKNKV  60
CRKRLLRGKR ISRTDCPAQF MVMWSNHQDL FYVSKFVTQH NHDLAIAPEV HFLCSHRNVE  120
RHDIAQVESL LQAQVSISRA YEFLAQQSGG YHNMRLTEKD LYNKLRPKNM KYDEEGDAEM  180
AVRRMKAKGS TEKEFWFEYT IDKHRRLANM FWRDHQSLLD YIAYGDVLIV DITYKTNRYS  240
KPMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-21FAR1 family protein