PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000846.1_g000009.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 159aa    MW: 18142 Da    PI: 10
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000846.1_g000009.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.7e-1055102455
                                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                +h+ +Er RR++i+ ++  L++l+P +    +k   Ka iL + ++Y++ Lq
  Rmu_sc0000846.1_g000009.1  55 SHSLAERARRAQIRMRMKLLQSLVPGC----DKITGKAHILDEIIKYVQLLQ 102
                                8*************************9....899***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MISRNLEQKR TGSENGNREH QLKELMGKRS RLSAEGVATE DYVRVKARRG EATDSHSLAE  60
RARRAQIRMR MKLLQSLVPG CDKITGKAHI LDEIIKYVQL LQNQVEVRSL AAKLAFVDLM  120
LYDCEPNPSG NACVPELYPV HVFCRRWGKP FCFPFAQRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.23e-32bHLH family protein