PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000851.1_g000015.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 259aa    MW: 28871.6 Da    PI: 4.438
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000851.1_g000015.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.21.2e-1747107357
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                +R+t+t++ql++L+el++    +yps e+++e+  +l    ++++++V++WFqN +a+e++
  Rmu_sc0000851.1_g000015.1  47 NRWTPTPYQLRILQELYYDkvLKYPSPEQIQEICLHLqqygQIEDKNVFFWFQNLKARERQ 107
                                7****************96679*************************************97 PP
2Wus_type_Homeobox93.61.7e-3045108264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp Q++iL+ely+ + l+ P+ e+iq+i  +L++yG+iedkNVf+WFQN kaRerqk
  Rmu_sc0000851.1_g000015.1  45 TNNRWTPTPYQLRILQELYYdKVLKYPSPEQIQEICLHLQQYGQIEDKNVFFWFQNLKARERQK 108
                                579***************99688999*************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MEPRTLQLME LQTQQQMELQ AQQPTEEGGS IQAAGSSANT PIRPTNNRWT PTPYQLRILQ  60
ELYYDKVLKY PSPEQIQEIC LHLQQYGQIE DKNVFFWFQN LKARERQKLK EFRNVRVGGS  120
LDINFGSTSS TDDGRSIDLN FGSTSSTSTD RSIDLNFGSR VGYGVDSYSS SPFNINTSTT  180
SFGTTEGQSF MEQRGGDHQE VETLPLFPMH GENVLGNPKT TSEEGSAYGW YSGGWDDNNG  240
GSCISLELSL NSSRAADMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.16e-23WOX family protein