PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000859.1_g000009.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 261aa    MW: 29742.2 Da    PI: 7.683
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000859.1_g000009.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM965.6e-3057754128
                        NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ +   ++ g+kk Lvfy g+apkg+kt+W+mheyrl
  Rmu_sc0000859.1_g000009.1   5 GEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKHIGK--PKALGIKKALVFYAGKAPKGVKTNWIMHEYRL 77 
                                579************************************98..778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MALYGEKEWY FFSPRDRKYP NGSRPNRAAG TGYWKATGAD KHIGKPKALG IKKALVFYAG  60
KAPKGVKTNW IMHEYRLANV DRSASKKNHN LRLDDWVLCR IYNKKGSIEK YNTATVDRNK  120
VATYSEIMDH EQKPVLKNIQ FNVAPSQGQQ TALAAVPVSQ HTDMLSGDYS APRLQHTTDC  180
SSSSDHVFSP EVQSEFQWSS PEFSELDNSM NLNFLDNNDQ FNYMDGFSLA DISDPFGNQA  240
QAQPQYQMDQ QDLFMYLQNQ I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.11e-73NAC family protein