PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000861.1_g000047.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 134aa MW: 14705.5 Da PI: 10.5323

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000861.1_g000047.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	92.8	7.3e-29	47	111	1	65
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65 a+g+kdrhsk++T++g+Rd Rv l a++a++f+d+qd+LG+d++sk ++WL+++ k+a e++ Rmu_sc0000861.1_g000047.1 47 ATGRKDRHSKVCTAKGPRDHRVQLAAHTAIQFYDVQDQLGYDRPSKSVDWLIKKVKAANNEMPPW 111 589*******************************************************9999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 134 aa Download sequence
MGESHNNLHH RAMTSFFAAS RLGLGIRTAS SSTASEIVEA RGHILRATGR KDRHSKVCTA 60 KGPRDHRVQL AAHTAIQFYD VQDQLGYDRP SKSVDWLIKK VKAANNEMPP WNPNSISVQT 120 TSSLTVPISA AQDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-40	TCP family protein