PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000882.1_g000012.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 341aa    MW: 38511.1 Da    PI: 7.1435
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000882.1_g000012.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1683e-52111361129
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                                lppGfrFhP+deelv++yL kkv++++ +l   + evd++k+ePwd+p+++  + kewyf+s+rd+kyatg r+nrat++gyWk
  Rmu_sc0000882.1_g000012.1  11 LPPGFRFHPRDEELVCDYLMKKVTHSNSTL---MIEVDLNKCEPWDIPESACVGGKEWYFYSQRDRKYATGLRTNRATATGYWK 91 
                                79***********************99666...889************7777799***************************** PP

                        NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                                atgkd+++++k+++lvg++ktLvfy+grapkg+k+dWvmhe+rle
  Rmu_sc0000882.1_g000012.1  92 ATGKDRPIFRKGTTLVGMRKTLVFYQGRAPKGRKSDWVMHEFRLE 136
                                ******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MSNISMVEAK LPPGFRFHPR DEELVCDYLM KKVTHSNSTL MIEVDLNKCE PWDIPESACV  60
GGKEWYFYSQ RDRKYATGLR TNRATATGYW KATGKDRPIF RKGTTLVGMR KTLVFYQGRA  120
PKGRKSDWVM HEFRLEDPFG SPEISSLKED WVLCRVFYKN RELIAAKPSM GSSISCYDDD  180
TGSSSHQLPA LMDSYISFDG QTHQQQQQHH HDYEYHHHQQ VPCFSIDTLF SQNQVTINPI  240
FTTQNSNIME QNVPSTGCGQ SSNAATTTFL DTANFSCDNR KVLKAVLSQL TKMESNCYPS  300
TPSSVLKGSS PQSFGGEAAG SSSDNYLSDH QVGMPNVWSH Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.21e-110NAC family protein