PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000898.1_g000011.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 376aa    MW: 43097.2 Da    PI: 4.3995
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000898.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM644.7e-20151492128
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk..kvka.....eekewyfFskrdkkyatgkrknr 76 
                                 pG rF P ++elv +yLk+ ++g+ ++  +  + ++d+y + ePw++ +  k+k       +k++yfF++++k ++t kr +r
  Rmu_sc0000898.1_g000011.1  15 LPGERFCPMEDELVLFYLKPMLSGQIVPGRNRvVFDCDLYGHqEPWEIWEafKTKRphdlrLNKDIYFFTQHKKMSSTAKRVRR 98 
                                589***********************777554499*****8879****742422224333334588****************** PP

                        NAM  77 atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                 + sg+Wk     k+v s  +g++vglkk  ++ +  + + ++  W++ e+ l
  Rmu_sc0000898.1_g000011.1  99 NVGSGTWKGDDAGKPVRSVeTGRVVGLKKRYTYKN--DDSVHNGCWILYEFYL 149
                                ********9999999988768999********985..4445599******976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MQKEFPMEEN RGNQLPGERF CPMEDELVLF YLKPMLSGQI VPGRNRVVFD CDLYGHQEPW  60
EIWEAFKTKR PHDLRLNKDI YFFTQHKKMS STAKRVRRNV GSGTWKGDDA GKPVRSVETG  120
RVVGLKKRYT YKNDDSVHNG CWILYEFYLD QSLRDNKQKL EDYVLCLLRK NGEPKTKIEK  180
KRKQREEEEV LENNYAFDDG EKSKREQEES LEPQAKRQRT VPSIGNAPLT MPSEDDAAFA  240
AELEESLECF EGGENGGLQQ LAAEVQSGPS FVDDHGIFNP LPEEDFLLAE MLEEMGMVDM  300
EELVLINGKS INIDVAAEEN VENSTLLSAP TSSMSLVEVS STVEQQKTAD EACSDWLESI  360
NFSAEENNFL FSEMQW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174183PKTKIEKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-14NAC family protein