PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000913.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 225aa MW: 26077.9 Da PI: 9.8783

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000913.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.6	8.6e-23	38	120	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 fY++YAke GF+v+ +s+k+ ng i+++++vCskeg+++ + kk r+r++tr +Cka+++v k+ gk++vt +++ Rmu_sc0000913.1_g000004.1 38 FYKSYAKESGFDVKSYTSEKK--NGVIVRKEYVCSKEGTSKLTGKK-----RNRNQTRAKCKARIVVVKRAtIGKYVVTIFVEG 114 ************9998887..**************99888.....99*******999888879******* PP FAR1 85 HnHela 90 HnH+l+ Rmu_sc0000913.1_g000004.1 115 HNHPLT 120 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MESKQSFNDT AIYCPQVKVD LIPVKNQEFH TLEDVETFYK SYAKESGFDV KSYTSEKKNG 60 VIVRKEYVCS KEGTSKLTGK KRNRNQTRAK CKARIVVVKR ATIGKYVVTI FVEGHNHPLT 120 TPRRKHLAKI HREVSLVHRS LTKQLTTVNV PTCTQFDFLG VHSGGLENIG CLQQDIYNYR 180 RDCRKEVKGH DGDMFHEYFL LEKEKDPSFI FKIESDNKNK ITHIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-24	FAR1 family protein