PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000945.1_g000037.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 145aa    MW: 16362.4 Da    PI: 8.4811
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000945.1_g000037.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.23.2e-092776144
                               TT--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHH CS
                   Homeobox  1 rrkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqV 44
                               rr+R+t+t++q+++L+elF++   r p+ e+ +++  +l    +++ ++V
  Rmu_sc0000945.1_g000037.1 27 RRSRWTPTTDQIRILKELFYNkgVRSPTVEQVQRIYLQLkwygKIEFKNV 76
                               89******************7779***********998866666665555 PP
2Wus_type_Homeobox64.42.2e-212878352
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfy 52
                               r+RWtPt++Qi+iL+el++ +G+r+P+ e++qri  +L+ yGkie kNV++
  Rmu_sc0000945.1_g000037.1 28 RSRWTPTTDQIRILKELFYnKGVRSPTVEQVQRIYLQLKWYGKIEFKNVYF 78
                               79**************98769****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MEPQTQQPTE DGGSDKSAGS SANMLCRRSR WTPTTDQIRI LKELFYNKGV RSPTVEQVQR  60
IYLQLKWYGK IEFKNVYFCG SIMEQRGEDH QEIKTLPLFP MHGEDIFGNM KTTSDGGGGH  120
GGGSHISLEL SLSCEGKARK SFWSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-18WOX family protein