PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000962.1_g000041.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 161aa    MW: 18569.4 Da    PI: 10.4973
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000962.1_g000041.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.74.2e-18102161356
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 
                                +R+++t++q+++L+elF++   r p++e+++++  +l    +++ ++V++WF N+Ra+ek
  Rmu_sc0000962.1_g000041.1 102 TRWNPTTDQIRILKELFYNkgVRSPTTEQIQRICLQLkwygKIESKKVYYWFGNHRAREK 161
                                8*****************7789************************************98 PP
2Wus_type_Homeobox92.53.7e-30100161262
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRer 62 
                                ++tRW+Pt++Qi+iL+el++ +G+r+P++e+iqri  +L+ yGkie+k V+yWF N++aRe+
  Rmu_sc0000962.1_g000041.1 100 TNTRWNPTTDQIRILKELFYnKGVRSPTTEQIQRICLQLKWYGKIESKKVYYWFGNHRAREK 161
                                789**************98769**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MRRDGLFEGM GSSYRMAVPI LHVQLMVVTK AKGGAETQSD IRFLHSLPLP EIMARLNPTL  60
DLQSFPIFLT PMEPQTQQPT EDGGRNKAAG SSANRLCRQT NTRWNPTTDQ IRILKELFYN  120
KGVRSPTTEQ IQRICLQLKW YGKIESKKVY YWFGNHRARE K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.17e-28WOX family protein