PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000979.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 145aa    MW: 16327.8 Da    PI: 4.9966
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000979.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.73.6e-1232120496
                                E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                         B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldg 86 
                                +lt+s+v  + ++ +p k      ++   s   ++ +   +sWe+++  + +++   + +  W+ Fv++n Lk+gD ++F+l+g
  Rmu_sc0000979.1_g000010.1  32 ILTKSHVKPLYQMEIPAKLD-P-VLPAGAS-VPMVLNFGDKSWEMTY--NETKRLkLMDRHSWRAFVDDNSLKAGDGCIFELTG 110
                                55666666666666665543.1.1222222.335677888*******..665554488889********************997 PP

                                SSEE..EEEE CS
                         B3  87 rsefelvvkv 96 
                                 ++++ v+kv
  Rmu_sc0000979.1_g000010.1 111 CDSTKVVFKV 120
                                6666555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MEDSAQSRAT PTIELHGDEF WPLSGKPFFD IILTKSHVKP LYQMEIPAKL DPVLPAGASV  60
PMVLNFGDKS WEMTYNETKR LKLMDRHSWR AFVDDNSLKA GDGCIFELTG CDSTKVVFKV  120
QILRGDIPAE LVEKYSGEVE KPIII