PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000982.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 193aa MW: 21576.3 Da PI: 9.9778

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000982.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	44.9	2e-14	30	91	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+ +t++q+++L+el+ + + p+ e+ ++++ +l +++ ++V++WF N+R +ekk Rmu_sc0000982.1_g000002.1 30 NTRWLPTTDQIRILKELYDNkgVKSPTIEQVQRITLQLkwygQIEFKNVYFWFVNQRVREKK 91 58***************7779************************************8 PP
2	Wus_type_Homeobox	84.1	1.6e-27	29	93	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW Pt++Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie kNV++WF N++ Re++k+ Rmu_sc0000982.1_g000002.1 29 SNTRWLPTTDQIRILKELYDnKGVKSPTIEQVQRITLQLKWYGQIEFKNVYFWFVNQRVREKKKK 93 789**************989**************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MEPQNRHPTE DGGSNKAAES SPNMHCKQSN TRWLPTTDQI RILKELYDNK GVKSPTIEQV 60 QRITLQLKWY GQIEFKNVYF WFVNQRVREK KKKRKLTSDV QVPKKRSGLV GGSINLNFGS 120 TSSADVGGSI MEQRGEDHQE VKTLPLFPMH GEDIFGNMKT TSDGGGGHGG GSYISLELSL 180 SCEGKAGKSF WSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	89	96	EKKKKRKL
2	90	95	KKKKRK
3	91	96	KKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	1e-26	WOX family protein