PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000999.1_g000036.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HSF
Protein Properties Length: 101aa    MW: 11859.9 Da    PI: 10.8835
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000999.1_g000036.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind26.51.7e-083572239
                               HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHH CS
               HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvldeeefakk 39
                               F  k++++++d++l+ +isw ++ +sfvv+d+ efa+ 
  Rmu_sc0000999.1_g000036.1 35 FCVKTFDLVDDPSLDLIISWGSTRRSFVVWDPVEFARL 72
                               999********************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MVRRARLNLS VLRVAIMWEC RSRFSVCKRL RCRRFCVKTF DLVDDPSLDL IISWGSTRRS  60
FVVWDPVEFA RLVSDRTRPE FHPEIRSGPA GPTLEEILPK I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.12e-15HSF family protein