PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001010.1_g000037.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

GRAS

Protein Properties

Length: 140aa MW: 15875.5 Da PI: 10.4063

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001010.1_g000037.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	38.9	1.3e-12	81	139	271	329
GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvpl 329 ++a++pre++ r++ Ere+ ++i+nv+aceg er+er t++kW+ r + G+k+ pl Rmu_sc0001010.1_g000037.1 81 MHATIPREDKRRMMFEREIYDNDIMNVIACEGLERFERPDTYKKWQIRNVRTGLKQHPL 139 57899*************************************************99886 PP

Sequence ? help Back to Top
Protein Sequence Length: 140 aa Download sequence
MWRLIKMRAV ALFIAVRSNM SSGSVVLHLE DACGGGIWPR GGRKLLVLLT KKAAGAAGSC 60 GYSRGAKGVA DCYVSYRGQR MHATIPREDK RRMMFEREIY DNDIMNVIAC EGLERFERPD 120 TYKKWQIRNV RTGLKQHPLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29060.1	5e-20	GRAS family protein