PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001035.1_g000078.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 164aa    MW: 19046.1 Da    PI: 4.5783
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001035.1_g000078.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.12.9e-2281411128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.d.iykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrkn 75 
                                lp+G+rF Ptd+el+++yL+ +++  +   +++++++ +   + ePw   +       k  ++e+ +yfF++r++ ++t kr  
  Rmu_sc0001035.1_g000078.1   8 LPVGVRFLPTDQELLDYYLRSRIAMGDQFRTDFVADCpHfFGDKEPWVVWQiyggaesKKVEDENTLYFFTNRRRLSPTAKRFD 91 
                                79********************9988855558899996424577***99644666654222355678***************** PP

                        NAM  76 ratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                r++ sg+W+a+   +ev + +g + glk+ + +  g   ++++  W+m+e++l
  Rmu_sc0001035.1_g000078.1  92 RKVGSGTWSAQYA-REVED-DGVVLGLKREFRYE-GGCDESHNDGWLMQEFQL 141
                                *********9976.99999.99**********97.66666689********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MAILSNKLPV GVRFLPTDQE LLDYYLRSRI AMGDQFRTDF VADCPHFFGD KEPWVVWQIY  60
GGAESKKVED ENTLYFFTNR RRLSPTAKRF DRKVGSGTWS AQYAREVEDD GVVLGLKREF  120
RYEGGCDESH NDGWLMQEFQ LDDDSDLEYH FFDNLVTGAR STTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.11e-16NAC family protein