PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001036.1_g000040.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 246aa    MW: 27942.5 Da    PI: 10.0548
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001036.1_g000040.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP752.2e-23190239150
                        TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieW 50 
                                a+g+kd+hsk++T +g+RdR++Rl++++a++f+d+qd+LG+d++sk ++W
  Rmu_sc0001036.1_g000040.1 190 ATGRKDSHSKVCTTKGPRDRSIRLVSHTAIQFYDMQDRLGYDQPSKVVDW 239
                                589*********************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MCLLRDCSVY KSPENEFSEP LKRPFHRGLP FDSLVCQDDK LQGCVDRTLD SRAFRGWIET  60
DNPWTNDDET DNALVAVGGV AIGICDGIFQ LQNACDDKTL PSLISLRRRR HWSFATAISL  120
SATAQEIGRR LHRTLRVYPR RRRQRLDHNN LHHRTTTSSS AASQLGLGIR TASSSTASEI  180
VEAQGHILRA TGRKDSHSKV CTTKGPRDRS IRLVSHTAIQ FYDMQDRLGY DQPSKVVDWP  240
RRTRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.13e-28TCP family protein