PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001038.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 146aa    MW: 16721.8 Da    PI: 9.657
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001038.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.8e-192070255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                               +y+GVr+++ +g+++AeIrd +    +  r +lg+f ta+eAa+a+++a+ +++g
  Rmu_sc0001038.1_g000002.1 20 KYRGVRRRP-WGKFAAEIRDSTR---QgVRLWLGTFNTAKEAARAYDKAAFSMRG 70
                               8********.**********322...24*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MKEGPSKSNK IEDERQKYVK YRGVRRRPWG KFAAEIRDST RQGVRLWLGT FNTAKEAARA  60
YDKAAFSMRG PLAILNFPSE HGFVYADSAA TSSSFTASSS TLHNMEVTMR TEPRKEVFVF  120
EYLDDKVLEE LLDFENNSKR VELGVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.18e-31ERF family protein