PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001051.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 208aa    MW: 22678.5 Da    PI: 9.3146
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001051.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.98.1e-2192142256
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                +y+GVr+++ +g+W+AeIrdp+    r +r++lg+f taeeAa+a+++a+ +++ge
  Rmu_sc0001051.1_g000001.1  92 KYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFKTAEEAARAYDKAAIEFRGE 142
                                8********.**********82....48*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MSSHSGGLPK EQEHAIMVSA LKQVICGGGG RIASRSSGHS RPAVEGGSGT KKVVISISDG  60
DTCQVCRIDG CLGCEFFPPS KPDKGKRIKK GKYRGVRQRP WGKWAAEIRD PRRAARVWLG  120
TFKTAEEAAR AYDKAAIEFR GERAKLNFPL SSEAGTTSAA WTMQSMETGE VNQVNASSVK  180
SANQEEGQSS DVKDEDIDRF IWEMLKDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-24ERF family protein